Differences in the sensitivity of fungi and bacteria to season and invertebrates affect leaf litter decomposition in a Mediterranean stream.
Identifieur interne : 001921 ( Main/Exploration ); précédent : 001920; suivant : 001922Differences in the sensitivity of fungi and bacteria to season and invertebrates affect leaf litter decomposition in a Mediterranean stream.
Auteurs : Juanita Mora-G Mez [États-Unis] ; Arturo Elosegi [Espagne] ; Sofia Duarte [Portugal] ; Fernanda Cássio [Portugal] ; Cláudia Pascoal [Portugal] ; Anna M. Romaní [Espagne]Source :
- FEMS microbiology ecology [ 1574-6941 ] ; 2016.
Descripteurs français
- KwdFr :
- Animaux (MeSH), Bactéries (croissance et développement), Bactéries (métabolisme), Biomasse (MeSH), Champignons (croissance et développement), Champignons (métabolisme), Climat (MeSH), Dépollution biologique de l'environnement (MeSH), Espagne (MeSH), Feuilles de plante (microbiologie), Feuilles de plante (métabolisme), Invertébrés (croissance et développement), Invertébrés (métabolisme), Lignine (métabolisme), Populus (microbiologie), Populus (métabolisme), Rivières (microbiologie), Région méditerranéenne (MeSH), Saisons (MeSH), Écosystème (MeSH).
- MESH :
- croissance et développement : Bactéries, Champignons, Invertébrés.
- microbiologie : Feuilles de plante, Populus, Rivières.
- métabolisme : Bactéries, Champignons, Feuilles de plante, Invertébrés, Lignine, Populus.
- Animaux, Biomasse, Climat, Dépollution biologique de l'environnement, Espagne, Région méditerranéenne, Saisons, Écosystème.
English descriptors
- KwdEn :
- Animals (MeSH), Bacteria (growth & development), Bacteria (metabolism), Biodegradation, Environmental (MeSH), Biomass (MeSH), Climate (MeSH), Ecosystem (MeSH), Fungi (growth & development), Fungi (metabolism), Invertebrates (growth & development), Invertebrates (metabolism), Lignin (metabolism), Mediterranean Region (MeSH), Plant Leaves (metabolism), Plant Leaves (microbiology), Populus (metabolism), Populus (microbiology), Rivers (microbiology), Seasons (MeSH), Spain (MeSH).
- MESH :
- chemical , metabolism : Lignin.
- growth & development : Bacteria, Fungi, Invertebrates.
- metabolism : Bacteria, Fungi, Invertebrates, Plant Leaves, Populus.
- microbiology : Plant Leaves, Populus, Rivers.
- Animals, Biodegradation, Environmental, Biomass, Climate, Ecosystem, Mediterranean Region, Seasons, Spain.
Abstract
Microorganisms are key drivers of leaf litter decomposition; however, the mechanisms underlying the dynamics of different microbial groups are poorly understood. We investigated the effects of seasonal variation and invertebrates on fungal and bacterial dynamics, and on leaf litter decomposition. We followed the decomposition of Populus nigra litter in a Mediterranean stream through an annual cycle, using fine and coarse mesh bags. Irrespective of the season, microbial decomposition followed two stages. Initially, bacterial contribution to total microbial biomass was higher compared to later stages, and it was related to disaccharide and lignin degradation; in a later stage, bacteria were less important and were associated with hemicellulose and cellulose degradation, while fungi were related to lignin decomposition. The relevance of microbial groups in decomposition differed among seasons: fungi were more important in spring, whereas in summer, water quality changes seemed to favour bacteria and slowed down lignin and hemicellulose degradation. Invertebrates influenced litter-associated microbial assemblages (especially bacteria), stimulated enzyme efficiencies and reduced fungal biomass. We conclude that bacterial and fungal assemblages play distinctive roles in microbial decomposition and differ in their sensitivity to environmental changes, ultimately affecting litter decomposition, which might be particularly relevant in highly seasonal ecosystems, such as intermittent streams.
DOI: 10.1093/femsec/fiw121
PubMed: 27288197
Affiliations:
- Espagne, Portugal, États-Unis
- Catalogne, Pays basque, Région Nord (Portugal)
- Braga
- Université du Minho
Links toward previous steps (curation, corpus...)
Le document en format XML
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Romaní</name><affiliation wicri:level="2"><nlm:affiliation>GRECO, Institute of Aquatic Ecology, University of Girona, Campus Montilivi, 17071 Girona, Spain.</nlm:affiliation><country xml:lang="fr">Espagne</country><wicri:regionArea>GRECO, Institute of Aquatic Ecology, University of Girona, Campus Montilivi, 17071 Girona</wicri:regionArea><placeName><region nuts="2" type="communauté">Catalogne</region></placeName></affiliation></author></analytic><series><title level="j">FEMS microbiology ecology</title><idno type="eISSN">1574-6941</idno><imprint><date when="2016" type="published">2016</date></imprint></series></biblStruct></sourceDesc></fileDesc><profileDesc><textClass><keywords scheme="KwdEn" xml:lang="en"><term>Animals (MeSH)</term><term>Bacteria (growth & development)</term><term>Bacteria (metabolism)</term><term>Biodegradation, Environmental (MeSH)</term><term>Biomass (MeSH)</term><term>Climate (MeSH)</term><term>Ecosystem (MeSH)</term><term>Fungi (growth & development)</term><term>Fungi (metabolism)</term><term>Invertebrates (growth & development)</term><term>Invertebrates (metabolism)</term><term>Lignin (metabolism)</term><term>Mediterranean Region (MeSH)</term><term>Plant Leaves (metabolism)</term><term>Plant Leaves (microbiology)</term><term>Populus (metabolism)</term><term>Populus (microbiology)</term><term>Rivers (microbiology)</term><term>Seasons (MeSH)</term><term>Spain (MeSH)</term></keywords><keywords scheme="KwdFr" xml:lang="fr"><term>Animaux (MeSH)</term><term>Bactéries (croissance et développement)</term><term>Bactéries (métabolisme)</term><term>Biomasse (MeSH)</term><term>Champignons (croissance et développement)</term><term>Champignons (métabolisme)</term><term>Climat (MeSH)</term><term>Dépollution biologique de l'environnement (MeSH)</term><term>Espagne (MeSH)</term><term>Feuilles de plante (microbiologie)</term><term>Feuilles de plante (métabolisme)</term><term>Invertébrés (croissance et développement)</term><term>Invertébrés (métabolisme)</term><term>Lignine (métabolisme)</term><term>Populus (microbiologie)</term><term>Populus (métabolisme)</term><term>Rivières (microbiologie)</term><term>Région méditerranéenne (MeSH)</term><term>Saisons (MeSH)</term><term>Écosystème (MeSH)</term></keywords><keywords scheme="MESH" type="chemical" qualifier="metabolism" xml:lang="en"><term>Lignin</term></keywords><keywords scheme="MESH" qualifier="croissance et développement" xml:lang="fr"><term>Bactéries</term><term>Champignons</term><term>Invertébrés</term></keywords><keywords scheme="MESH" qualifier="growth & development" xml:lang="en"><term>Bacteria</term><term>Fungi</term><term>Invertebrates</term></keywords><keywords scheme="MESH" qualifier="metabolism" xml:lang="en"><term>Bacteria</term><term>Fungi</term><term>Invertebrates</term><term>Plant Leaves</term><term>Populus</term></keywords><keywords scheme="MESH" qualifier="microbiologie" xml:lang="fr"><term>Feuilles de plante</term><term>Populus</term><term>Rivières</term></keywords><keywords scheme="MESH" qualifier="microbiology" xml:lang="en"><term>Plant Leaves</term><term>Populus</term><term>Rivers</term></keywords><keywords scheme="MESH" qualifier="métabolisme" xml:lang="fr"><term>Bactéries</term><term>Champignons</term><term>Feuilles de plante</term><term>Invertébrés</term><term>Lignine</term><term>Populus</term></keywords><keywords scheme="MESH" xml:lang="en"><term>Animals</term><term>Biodegradation, Environmental</term><term>Biomass</term><term>Climate</term><term>Ecosystem</term><term>Mediterranean Region</term><term>Seasons</term><term>Spain</term></keywords><keywords scheme="MESH" xml:lang="fr"><term>Animaux</term><term>Biomasse</term><term>Climat</term><term>Dépollution biologique de l'environnement</term><term>Espagne</term><term>Région méditerranéenne</term><term>Saisons</term><term>Écosystème</term></keywords></textClass></profileDesc></teiHeader><front><div type="abstract" xml:lang="en">Microorganisms are key drivers of leaf litter decomposition; however, the mechanisms underlying the dynamics of different microbial groups are poorly understood. We investigated the effects of seasonal variation and invertebrates on fungal and bacterial dynamics, and on leaf litter decomposition. We followed the decomposition of Populus nigra litter in a Mediterranean stream through an annual cycle, using fine and coarse mesh bags. Irrespective of the season, microbial decomposition followed two stages. Initially, bacterial contribution to total microbial biomass was higher compared to later stages, and it was related to disaccharide and lignin degradation; in a later stage, bacteria were less important and were associated with hemicellulose and cellulose degradation, while fungi were related to lignin decomposition. The relevance of microbial groups in decomposition differed among seasons: fungi were more important in spring, whereas in summer, water quality changes seemed to favour bacteria and slowed down lignin and hemicellulose degradation. Invertebrates influenced litter-associated microbial assemblages (especially bacteria), stimulated enzyme efficiencies and reduced fungal biomass. We conclude that bacterial and fungal assemblages play distinctive roles in microbial decomposition and differ in their sensitivity to environmental changes, ultimately affecting litter decomposition, which might be particularly relevant in highly seasonal ecosystems, such as intermittent streams.</div></front></TEI><pubmed><MedlineCitation Status="MEDLINE" IndexingMethod="Curated" Owner="NLM"><PMID Version="1">27288197</PMID><DateCompleted><Year>2017</Year><Month>08</Month><Day>03</Day></DateCompleted><DateRevised><Year>2018</Year><Month>12</Month><Day>02</Day></DateRevised><Article PubModel="Print-Electronic"><Journal><ISSN IssnType="Electronic">1574-6941</ISSN><JournalIssue CitedMedium="Internet"><Volume>92</Volume><Issue>8</Issue><PubDate><Year>2016</Year><Month>08</Month></PubDate></JournalIssue><Title>FEMS microbiology ecology</Title><ISOAbbreviation>FEMS Microbiol Ecol</ISOAbbreviation></Journal><ArticleTitle>Differences in the sensitivity of fungi and bacteria to season and invertebrates affect leaf litter decomposition in a Mediterranean stream.</ArticleTitle><ELocationID EIdType="doi" ValidYN="Y">10.1093/femsec/fiw121</ELocationID><ELocationID EIdType="pii" ValidYN="Y">fiw121</ELocationID><Abstract><AbstractText>Microorganisms are key drivers of leaf litter decomposition; however, the mechanisms underlying the dynamics of different microbial groups are poorly understood. We investigated the effects of seasonal variation and invertebrates on fungal and bacterial dynamics, and on leaf litter decomposition. We followed the decomposition of Populus nigra litter in a Mediterranean stream through an annual cycle, using fine and coarse mesh bags. Irrespective of the season, microbial decomposition followed two stages. Initially, bacterial contribution to total microbial biomass was higher compared to later stages, and it was related to disaccharide and lignin degradation; in a later stage, bacteria were less important and were associated with hemicellulose and cellulose degradation, while fungi were related to lignin decomposition. The relevance of microbial groups in decomposition differed among seasons: fungi were more important in spring, whereas in summer, water quality changes seemed to favour bacteria and slowed down lignin and hemicellulose degradation. Invertebrates influenced litter-associated microbial assemblages (especially bacteria), stimulated enzyme efficiencies and reduced fungal biomass. We conclude that bacterial and fungal assemblages play distinctive roles in microbial decomposition and differ in their sensitivity to environmental changes, ultimately affecting litter decomposition, which might be particularly relevant in highly seasonal ecosystems, such as intermittent streams.</AbstractText><CopyrightInformation>© FEMS 2016. All rights reserved. For permissions, please e-mail: journals.permissions@oup.com.</CopyrightInformation></Abstract><AuthorList CompleteYN="Y"><Author ValidYN="Y"><LastName>Mora-Gómez</LastName><ForeName>Juanita</ForeName><Initials>J</Initials><AffiliationInfo><Affiliation>GRECO, Institute of Aquatic Ecology, University of Girona, Campus Montilivi, 17071 Girona, Spain juanita.mora@udg.edu.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Elosegi</LastName><ForeName>Arturo</ForeName><Initials>A</Initials><AffiliationInfo><Affiliation>Faculty of Science and Technology, University of the Basque Country, UPV/EHU, PO Box 644, 48080 Bilbao, Spain.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Duarte</LastName><ForeName>Sofia</ForeName><Initials>S</Initials><AffiliationInfo><Affiliation>CBMA-Centre of Molecular and Environmental Biology, Department of Biology, University of Minho, Campus de Gualtar, 4710-057 Braga, Portugal.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Cássio</LastName><ForeName>Fernanda</ForeName><Initials>F</Initials><AffiliationInfo><Affiliation>CBMA-Centre of Molecular and Environmental Biology, Department of Biology, University of Minho, Campus de Gualtar, 4710-057 Braga, Portugal.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Pascoal</LastName><ForeName>Cláudia</ForeName><Initials>C</Initials><AffiliationInfo><Affiliation>CBMA-Centre of Molecular and Environmental Biology, Department of Biology, University of Minho, Campus de Gualtar, 4710-057 Braga, Portugal.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Romaní</LastName><ForeName>Anna M</ForeName><Initials>AM</Initials><AffiliationInfo><Affiliation>GRECO, Institute of Aquatic Ecology, University of Girona, Campus Montilivi, 17071 Girona, Spain.</Affiliation></AffiliationInfo></Author></AuthorList><Language>eng</Language><PublicationTypeList><PublicationType UI="D016428">Journal Article</PublicationType></PublicationTypeList><ArticleDate DateType="Electronic"><Year>2016</Year><Month>06</Month><Day>09</Day></ArticleDate></Article><MedlineJournalInfo><Country>England</Country><MedlineTA>FEMS Microbiol Ecol</MedlineTA><NlmUniqueID>8901229</NlmUniqueID><ISSNLinking>0168-6496</ISSNLinking></MedlineJournalInfo><ChemicalList><Chemical><RegistryNumber>9005-53-2</RegistryNumber><NameOfSubstance UI="D008031">Lignin</NameOfSubstance></Chemical></ChemicalList><CitationSubset>IM</CitationSubset><MeshHeadingList><MeshHeading><DescriptorName UI="D000818" MajorTopicYN="N">Animals</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D001419" MajorTopicYN="N">Bacteria</DescriptorName><QualifierName UI="Q000254" MajorTopicYN="N">growth & development</QualifierName><QualifierName UI="Q000378" MajorTopicYN="Y">metabolism</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D001673" MajorTopicYN="N">Biodegradation, Environmental</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D018533" MajorTopicYN="N">Biomass</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D002980" MajorTopicYN="N">Climate</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D017753" MajorTopicYN="N">Ecosystem</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D005658" MajorTopicYN="N">Fungi</DescriptorName><QualifierName UI="Q000254" MajorTopicYN="N">growth & development</QualifierName><QualifierName UI="Q000378" MajorTopicYN="Y">metabolism</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D007448" MajorTopicYN="N">Invertebrates</DescriptorName><QualifierName UI="Q000254" MajorTopicYN="N">growth & development</QualifierName><QualifierName UI="Q000378" MajorTopicYN="Y">metabolism</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D008031" MajorTopicYN="N">Lignin</DescriptorName><QualifierName UI="Q000378" MajorTopicYN="Y">metabolism</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D019083" MajorTopicYN="N">Mediterranean Region</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D018515" MajorTopicYN="N">Plant Leaves</DescriptorName><QualifierName UI="Q000378" MajorTopicYN="Y">metabolism</QualifierName><QualifierName UI="Q000382" MajorTopicYN="N">microbiology</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D032107" MajorTopicYN="N">Populus</DescriptorName><QualifierName UI="Q000378" MajorTopicYN="Y">metabolism</QualifierName><QualifierName UI="Q000382" MajorTopicYN="N">microbiology</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D045483" MajorTopicYN="N">Rivers</DescriptorName><QualifierName UI="Q000382" MajorTopicYN="Y">microbiology</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D012621" MajorTopicYN="N">Seasons</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D013030" MajorTopicYN="N">Spain</DescriptorName></MeshHeading></MeshHeadingList><KeywordList Owner="NOTNLM"><Keyword MajorTopicYN="Y">Populus nigra</Keyword><Keyword MajorTopicYN="Y">enzyme efficiency</Keyword><Keyword MajorTopicYN="Y">extracellular enzymes</Keyword><Keyword MajorTopicYN="Y">litter breakdown</Keyword><Keyword MajorTopicYN="Y">microbial assemblages</Keyword></KeywordList></MedlineCitation><PubmedData><History><PubMedPubDate PubStatus="accepted"><Year>2016</Year><Month>06</Month><Day>01</Day></PubMedPubDate><PubMedPubDate PubStatus="entrez"><Year>2016</Year><Month>6</Month><Day>12</Day><Hour>6</Hour><Minute>0</Minute></PubMedPubDate><PubMedPubDate PubStatus="pubmed"><Year>2016</Year><Month>6</Month><Day>12</Day><Hour>6</Hour><Minute>0</Minute></PubMedPubDate><PubMedPubDate PubStatus="medline"><Year>2017</Year><Month>8</Month><Day>5</Day><Hour>6</Hour><Minute>0</Minute></PubMedPubDate></History><PublicationStatus>ppublish</PublicationStatus><ArticleIdList><ArticleId IdType="pubmed">27288197</ArticleId><ArticleId IdType="pii">fiw121</ArticleId><ArticleId IdType="doi">10.1093/femsec/fiw121</ArticleId></ArticleIdList></PubmedData></pubmed><affiliations><list><country><li>Espagne</li><li>Portugal</li><li>États-Unis</li></country><region><li>Catalogne</li><li>Pays basque</li><li>Région Nord (Portugal)</li></region><settlement><li>Braga</li></settlement><orgName><li>Université du Minho</li></orgName></list><tree><country name="États-Unis"><noRegion><name sortKey="Mora G Mez, Juanita" sort="Mora G Mez, Juanita" uniqKey="Mora G Mez J" first="Juanita" last="Mora-G Mez">Juanita Mora-G Mez</name></noRegion></country><country name="Espagne"><region name="Pays basque"><name sortKey="Elosegi, Arturo" sort="Elosegi, Arturo" uniqKey="Elosegi A" first="Arturo" last="Elosegi">Arturo Elosegi</name></region><name sortKey="Romani, Anna M" sort="Romani, Anna M" uniqKey="Romani A" first="Anna M" last="Romaní">Anna M. Romaní</name></country><country name="Portugal"><region name="Région Nord (Portugal)"><name sortKey="Duarte, Sofia" sort="Duarte, Sofia" uniqKey="Duarte S" first="Sofia" last="Duarte">Sofia Duarte</name></region><name sortKey="Cassio, Fernanda" sort="Cassio, Fernanda" uniqKey="Cassio F" first="Fernanda" last="Cássio">Fernanda Cássio</name><name sortKey="Pascoal, Claudia" sort="Pascoal, Claudia" uniqKey="Pascoal C" first="Cláudia" last="Pascoal">Cláudia Pascoal</name></country></tree></affiliations></record>Pour manipuler ce document sous Unix (Dilib)
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